dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00283
Location and strand information: 329003 - 331375 (-)
Family: 1.B.14.6.5
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00284
Location and strand information: 331580 - 332629 (+)
Family: 9.B.97.3.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00285
Location and strand information: 332638 - 333837 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00286
Location and strand information: 333940 - 336138 (+)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2343
Protein molecular weight: 82846.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00287
Location and strand information: 336173 - 338455 (+)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1225
Protein molecular weight: 86475.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00288
Location and strand information: 338575 - 340290 (+)
Family: GH110|3.2.1.22|CBM51
Protein type: CAZyme
Protein description: Alpha-1,3-galactosidase A
Protein isoelectric point: 6.7445
Protein molecular weight: 64557.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00289
Location and strand information: 340320 - 342719 (+)
Family: GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.2135
Protein molecular weight: 88576.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00290
Location and strand information: 342998 - 347032 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00291
Location and strand information: 347054 - 347206 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00292
Location and strand information: 347240 - 349264 (+)
Family: GH27|GH36
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7306
Protein molecular weight: 75786.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00293
Location and strand information: 349306 - 352368 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00294
Location and strand information: 352395 - 354041 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00295
Location and strand information: 354638 - 355657 (+)
Family: null
Protein type: null
Protein description: Aldose 1-epimerase

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00296
Location and strand information: 355895 - 358915 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00297
Location and strand information: 358938 - 360605 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00298
Location and strand information: 360621 - 363563 (+)
Family: CBM32|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.0858
Protein molecular weight: 110763.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00299
Location and strand information: 363574 - 365526 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00300
Location and strand information: 365644 - 367800 (+)
Family: GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase AgaA
Protein isoelectric point: 6.5088
Protein molecular weight: 82802.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00301
Location and strand information: 368167 - 372129 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00302
Location and strand information: 372297 - 374273 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.9716
Protein molecular weight: 74879.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00303
Location and strand information: 374281 - 375762 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00304
Location and strand information: 375766 - 377775 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00305
Location and strand information: 377868 - 379502 (-)
Family: 8.A.46.1.5
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00306
Location and strand information: 379531 - 382632 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00307
Location and strand information: 382665 - 384593 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 5.7484
Protein molecular weight: 73703.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00308
Location and strand information: 384984 - 385577 (+)
Family: GerE
Protein type: TF
Protein description: ECF RNA polymerase sigma factor SigW

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00309
Location and strand information: 385638 - 386639 (+)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_1|CGC6
Gene ID: MGYG000002560_00310
Location and strand information: 386725 - 390102 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002560_00286	GH92_e34\|3.2.1.24\|3.2.1.-	hostglycan
MGYG000002560_00287	GH92_e21
MGYG000002560_00288	GH110_e10\|CBM51_e3\|3.2.1.-
MGYG000002560_00289	GH95_e3
MGYG000002560_00292	GH36_e44
MGYG000002560_00298	GH2_e67\|CBM32_e115
MGYG000002560_00300	GH36_e5\|3.2.1.22	alpha-galactan
MGYG000002560_00302	GH97_e11\|3.2.1.22	alpha-glucan
MGYG000002560_00307	GH97_e20\|3.2.1.22	alpha-glucan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is alpha-glucan

Substrate predicted by dbCAN-PUL is mucin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002560_00283	hypothetical protein	TC	329003	331375	-	1.B.14.6.5
MGYG000002560_00284	hypothetical protein	TC	331580	332629	+	9.B.97.3.1
MGYG000002560_00285	hypothetical protein	null	332638	333837	+	DUF418
MGYG000002560_00286	hypothetical protein	CAZyme	333940	336138	+	GH92
MGYG000002560_00287	hypothetical protein	CAZyme	336173	338455	+	GH92
MGYG000002560_00288	Alpha-1,3-galactosidase A	CAZyme	338575	340290	+	GH110\| 3.2.1.22\| CBM51
MGYG000002560_00289	hypothetical protein	CAZyme	340320	342719	+	GH95
MGYG000002560_00290	Sensor histidine kinase RcsC	TF	342998	347032	+	HTH_AraC
MGYG000002560_00291	hypothetical protein	null	347054	347206	+	No domain
MGYG000002560_00292	hypothetical protein	CAZyme	347240	349264	+	GH27\| GH36
MGYG000002560_00293	TonB-dependent receptor SusC	TC	349306	352368	+	1.B.14.6.1
MGYG000002560_00294	hypothetical protein	TC	352395	354041	+	8.A.46.1.3
MGYG000002560_00295	Aldose 1-epimerase	null	354638	355657	+	Aldose_epim
MGYG000002560_00296	TonB-dependent receptor SusC	TC	355895	358915	+	1.B.14.6.1
MGYG000002560_00297	hypothetical protein	null	358938	360605	+	SusD-like_3\| SusD_RagB
MGYG000002560_00298	Beta-galactosidase	CAZyme	360621	363563	+	CBM32\| GH2
MGYG000002560_00299	hypothetical protein	null	363574	365526	+	SASA\| SASA
MGYG000002560_00300	Alpha-galactosidase AgaA	CAZyme	365644	367800	+	GH36
MGYG000002560_00301	Sensor histidine kinase RcsC	TF	368167	372129	-	HTH_AraC
MGYG000002560_00302	Retaining alpha-galactosidase	CAZyme	372297	374273	-	GH97
MGYG000002560_00303	hypothetical protein	null	374281	375762	-	No domain
MGYG000002560_00304	hypothetical protein	null	375766	377775	-	No domain
MGYG000002560_00305	hypothetical protein	TC	377868	379502	-	8.A.46.1.5
MGYG000002560_00306	TonB-dependent receptor SusC	TC	379531	382632	-	1.B.14.6.1
MGYG000002560_00307	Retaining alpha-galactosidase	CAZyme	382665	384593	-	GH97
MGYG000002560_00308	ECF RNA polymerase sigma factor SigW	TF	384984	385577	+	GerE
MGYG000002560_00309	hypothetical protein	STP	385638	386639	+	FecR
MGYG000002560_00310	TonB-dependent receptor SusC	TC	386725	390102	+	1.B.14.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature